Exercise 1: Segregation types and quality | Exercise 2: checking for "shifted" markers | Exercise 3: select acceptably scored markers | Exercise 4: combine probes

Exercise 1: extract data from SNP array | Illumina | Affymetrix | Read and convert the array data | Exercise 2: Rename the samples and separate by ploidy level | Exercise 3: Filtering the data based on total signal intensity | 3a: Selection of samples based on total signal intensity | 3b: Selection of markers based on total signal intensity | 3c: Selection based on R values of samples within markers | Excersise 4: run fitPoly